Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEMA3CQ99985 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 AL512638.1-201ENST00000457493 794 ntBASIC16.06■□□□□ 0.16
SEMA3CQ99985 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 AC004890.2-204ENST00000481968 304 ntBASIC16.06■□□□□ 0.16
SEMA3CQ99985 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 AC044860.1-202ENST00000559481 777 ntBASIC16.06■□□□□ 0.16
SEMA3CQ99985 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEMA3CQ99985 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEMA3CQ99985 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 AL109936.8-201ENST00000641772 604 ntBASIC16.06■□□□□ 0.16
SEMA3CQ99985 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEMA3CQ99985 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEMA3CQ99985 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEMA3CQ99985 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.06■□□□□ 0.16
SEMA3CQ99985 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEMA3CQ99985 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 AC092850.2-201ENST00000623821 2697 ntBASIC16.05■□□□□ 0.16
SEMA3CQ99985 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 GK-202ENST00000378941 458 ntTSL 3 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.05■□□□□ 0.16
SEMA3CQ99985 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.05■□□□□ 0.16
SEMA3CQ99985 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 AC105917.1-201ENST00000506637 2539 ntBASIC16.05■□□□□ 0.16
SEMA3CQ99985 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.05■□□□□ 0.16
SEMA3CQ99985 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 Z97205.2-201ENST00000564697 1639 ntBASIC16.05■□□□□ 0.16
SEMA3CQ99985 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEMA3CQ99985 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEMA3CQ99985 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEMA3CQ99985 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEMA3CQ99985 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 CICP6-201ENST00000457191 2729 ntBASIC16.04■□□□□ 0.16
SEMA3CQ99985 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEMA3CQ99985 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEMA3CQ99985 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEMA3CQ99985 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEMA3CQ99985 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEMA3CQ99985 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEMA3CQ99985 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEMA3CQ99985 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 AC074338.1-201ENST00000416825 156 ntBASIC16.04■□□□□ 0.16
SEMA3CQ99985 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 AC009477.1-201ENST00000452936 217 ntBASIC16.04■□□□□ 0.16
SEMA3CQ99985 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 SDHAP3-202ENST00000515467 728 ntBASIC16.04■□□□□ 0.16
SEMA3CQ99985 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 AC009407.1-201ENST00000568958 598 ntBASIC16.04■□□□□ 0.16
SEMA3CQ99985 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SEMA3CQ99985 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms