Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 KRT18P43-201ENST00000469825 1281 ntBASIC21.09■□□□□ 0.97
CFAP53Q96M91 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 TP53TG3HP-202ENST00000569755 579 ntBASIC21.09■□□□□ 0.97
CFAP53Q96M91 CHCHD2P3-201ENST00000603038 451 ntBASIC21.09■□□□□ 0.97
CFAP53Q96M91 AC093726.1-201ENST00000608064 963 ntBASIC21.09■□□□□ 0.97
CFAP53Q96M91 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CFAP53Q96M91 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CFAP53Q96M91 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC21.08■□□□□ 0.97
CFAP53Q96M91 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CFAP53Q96M91 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC21.08■□□□□ 0.97
CFAP53Q96M91 ILF3-AS1-201ENST00000591501 1983 ntBASIC21.08■□□□□ 0.97
CFAP53Q96M91 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP53Q96M91 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CFAP53Q96M91 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP53Q96M91 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP53Q96M91 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.08■□□□□ 0.97
CFAP53Q96M91 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP53Q96M91 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP53Q96M91 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP53Q96M91 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP53Q96M91 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP53Q96M91 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP53Q96M91 MDH2-205ENST00000461263 648 ntTSL 2 BASIC21.08■□□□□ 0.97
CFAP53Q96M91 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CFAP53Q96M91 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.08■□□□□ 0.97
CFAP53Q96M91 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC21.08■□□□□ 0.97
CFAP53Q96M91 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
CFAP53Q96M91 AC007431.3-201ENST00000623221 587 ntBASIC21.08■□□□□ 0.97
CFAP53Q96M91 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CFAP53Q96M91 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CFAP53Q96M91 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CFAP53Q96M91 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.08■□□□□ 0.96
CFAP53Q96M91 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC21.08■□□□□ 0.96
CFAP53Q96M91 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CFAP53Q96M91 AC022188.1-201ENST00000620960 1664 ntBASIC21.08■□□□□ 0.96
CFAP53Q96M91 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CFAP53Q96M91 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CFAP53Q96M91 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.96
CFAP53Q96M91 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CFAP53Q96M91 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.08■□□□□ 0.96
CFAP53Q96M91 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CFAP53Q96M91 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CFAP53Q96M91 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CFAP53Q96M91 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CFAP53Q96M91 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CFAP53Q96M91 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CFAP53Q96M91 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 RN7SL399P-201ENST00000471648 279 ntBASIC21.07■□□□□ 0.96
CFAP53Q96M91 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 AC123567.1-201ENST00000548294 1261 ntBASIC21.07■□□□□ 0.96
CFAP53Q96M91 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CFAP53Q96M91 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 AL121723.1-201ENST00000445194 1519 ntBASIC21.07■□□□□ 0.96
CFAP53Q96M91 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CFAP53Q96M91 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CFAP53Q96M91 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CFAP53Q96M91 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CFAP53Q96M91 CYP2AB1P-202ENST00000454440 1456 ntBASIC21.07■□□□□ 0.96
CFAP53Q96M91 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CFAP53Q96M91 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CFAP53Q96M91 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CFAP53Q96M91 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CFAP53Q96M91 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CFAP53Q96M91 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CFAP53Q96M91 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CFAP53Q96M91 PRAL-201ENST00000624952 3286 ntBASIC21.06■□□□□ 0.96
CFAP53Q96M91 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CFAP53Q96M91 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.06■□□□□ 0.96
CFAP53Q96M91 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CFAP53Q96M91 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CFAP53Q96M91 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CFAP53Q96M91 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms