Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
VPS8Q8N3P4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC24.36■■□□□ 1.49
VPS8Q8N3P4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
VPS8Q8N3P4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
VPS8Q8N3P4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 ACTBP8-201ENST00000403258 1108 ntBASIC24.35■■□□□ 1.49
VPS8Q8N3P4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 PTP4A1P2-201ENST00000546033 454 ntBASIC24.35■■□□□ 1.49
VPS8Q8N3P4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 AC009486.1-201ENST00000569860 813 ntBASIC24.35■■□□□ 1.49
VPS8Q8N3P4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC24.35■■□□□ 1.49
VPS8Q8N3P4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 BID-213ENST00000615414 2236 ntTSL 5 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 NME2-201ENST00000393183 568 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 CROCCP4-201ENST00000457096 498 ntBASIC24.35■■□□□ 1.49
VPS8Q8N3P4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 KRT17P8-201ENST00000540749 863 ntBASIC24.35■■□□□ 1.49
VPS8Q8N3P4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 SAMD11P1-201ENST00000571429 661 ntBASIC24.35■■□□□ 1.49
VPS8Q8N3P4 PRSS30P-206ENST00000641773 873 ntBASIC24.35■■□□□ 1.49
VPS8Q8N3P4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS8Q8N3P4 AC008894.3-201ENST00000624324 3103 ntBASIC24.35■■□□□ 1.49
VPS8Q8N3P4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 BAATP1-201ENST00000412284 1225 ntBASIC24.34■■□□□ 1.49
VPS8Q8N3P4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC24.34■■□□□ 1.49
VPS8Q8N3P4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC24.33■■□□□ 1.49
VPS8Q8N3P4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms