Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 LINC02199-201ENST00000506655 2702 ntBASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRTM4Q86VH4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 AP003680.1-201ENST00000598970 3660 ntBASIC15.52■□□□□ 0.07
LRRTM4Q86VH4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 TOMM22P5-201ENST00000416399 439 ntBASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 KRT18P64-201ENST00000434946 1219 ntBASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 COX20P2-201ENST00000452636 358 ntBASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 AC027307.3-201ENST00000594262 1100 ntBASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM4Q86VH4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 AC046158.3-201ENST00000624947 2558 ntBASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 API5-211ENST00000534695 560 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 RARRES2P5-201ENST00000564013 466 ntBASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 RRP7BP-205ENST00000566851 833 ntBASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 AC140912.1-201ENST00000577171 1054 ntBASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 SPDYE22P-201ENST00000582158 798 ntBASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 AC099568.2-201ENST00000609194 695 ntBASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 AL662799.1-202ENST00000614205 422 ntBASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LRRTM4Q86VH4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms