Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NHLRC1Q6VVB1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 HIST3H2BA-201ENST00000436555 524 ntBASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 AC109322.1-201ENST00000524499 1264 ntBASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 AC018892.3-201ENST00000623986 2499 ntBASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 SNX18-202ENST00000343017 3140 ntBASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 AC022532.1-201ENST00000624563 1728 ntBASIC14.27□□□□□ -0.13
NHLRC1Q6VVB1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 KRT8P37-201ENST00000451609 1420 ntBASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 MIR4453-201ENST00000584019 89 ntBASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 AC097359.3-201ENST00000603982 1210 ntBASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 RN7SL828P-201ENST00000607615 303 ntBASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 AC063926.3-201ENST00000624734 5658 ntBASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 NORAD-201ENST00000565493 5339 ntBASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NHLRC1Q6VVB1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.25□□□□□ -0.13
NHLRC1Q6VVB1 AC069262.1-201ENST00000539058 672 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms