Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HERC4Q5GLZ8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 MRPS18AP1-201ENST00000414458 589 ntBASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 AC092580.3-201ENST00000430932 139 ntBASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 NFIC-211ENST00000641145 8399 ntBASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.71■□□□□ 0.43
HERC4Q5GLZ8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 CICP13-201ENST00000422015 2789 ntBASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 AC241585.1-201ENST00000433527 519 ntBASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.7■□□□□ 0.42
HERC4Q5GLZ8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 EEF1DP4-201ENST00000446006 880 ntBASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 PHKG1P2-201ENST00000457537 863 ntBASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 AL450472.2-201ENST00000603663 1156 ntBASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
HERC4Q5GLZ8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms