Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN7AQ01118 AC008132.1-202ENST00000342005 1389 ntBASIC19.26■□□□□ 0.67
SCN7AQ01118 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN7AQ01118 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN7AQ01118 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN7AQ01118 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCN7AQ01118 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCN7AQ01118 CYP46A4P-201ENST00000414953 267 ntBASIC19.26■□□□□ 0.67
SCN7AQ01118 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.26■□□□□ 0.67
SCN7AQ01118 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.26■□□□□ 0.67
SCN7AQ01118 RN7SL11P-201ENST00000471305 293 ntBASIC19.26■□□□□ 0.67
SCN7AQ01118 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN7AQ01118 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN7AQ01118 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN7AQ01118 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SCN7AQ01118 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN7AQ01118 AC026740.1-201ENST00000607068 791 ntBASIC19.26■□□□□ 0.67
SCN7AQ01118 AC091544.8-201ENST00000619490 361 ntBASIC19.26■□□□□ 0.67
SCN7AQ01118 AC022748.3-201ENST00000621828 275 ntBASIC19.26■□□□□ 0.67
SCN7AQ01118 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.26■□□□□ 0.67
SCN7AQ01118 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SCN7AQ01118 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SCN7AQ01118 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN7AQ01118 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN7AQ01118 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCN7AQ01118 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN7AQ01118 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN7AQ01118 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN7AQ01118 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN7AQ01118 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN7AQ01118 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.26■□□□□ 0.67
SCN7AQ01118 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN7AQ01118 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 AL596087.1-201ENST00000400979 1969 ntBASIC19.25■□□□□ 0.67
SCN7AQ01118 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SCN7AQ01118 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 CHMP1AP1-201ENST00000445563 662 ntBASIC19.25■□□□□ 0.67
SCN7AQ01118 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN7AQ01118 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.25■□□□□ 0.67
SCN7AQ01118 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.25■□□□□ 0.67
SCN7AQ01118 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SCN7AQ01118 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.25■□□□□ 0.67
SCN7AQ01118 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SCN7AQ01118 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SCN7AQ01118 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN7AQ01118 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.24■□□□□ 0.67
SCN7AQ01118 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.24■□□□□ 0.67
SCN7AQ01118 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN7AQ01118 TMEM198B-204ENST00000484016 896 ntBASIC19.24■□□□□ 0.67
SCN7AQ01118 AC100850.1-201ENST00000506768 649 ntBASIC19.24■□□□□ 0.67
SCN7AQ01118 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.24■□□□□ 0.67
SCN7AQ01118 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
SCN7AQ01118 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN7AQ01118 AC138466.3-201ENST00000619983 221 ntBASIC19.24■□□□□ 0.67
SCN7AQ01118 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
SCN7AQ01118 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SCN7AQ01118 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SCN7AQ01118 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 AC091046.1-201ENST00000331871 207 ntBASIC19.24■□□□□ 0.67
SCN7AQ01118 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SCN7AQ01118 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCN7AQ01118 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.24■□□□□ 0.67
SCN7AQ01118 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.24■□□□□ 0.67
SCN7AQ01118 AC245884.6-201ENST00000515672 1067 ntBASIC19.24■□□□□ 0.67
SCN7AQ01118 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN7AQ01118 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.24■□□□□ 0.67
SCN7AQ01118 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.24■□□□□ 0.67
SCN7AQ01118 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.24■□□□□ 0.67
SCN7AQ01118 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.24■□□□□ 0.67
SCN7AQ01118 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN7AQ01118 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN7AQ01118 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SCN7AQ01118 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN7AQ01118 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN7AQ01118 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SCN7AQ01118 AC020916.1-201ENST00000587762 1774 ntBASIC19.23■□□□□ 0.67
SCN7AQ01118 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN7AQ01118 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms