Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CACNA1BQ00975 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CACNA1BQ00975 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CACNA1BQ00975 RBPMSLP-201ENST00000433427 502 ntBASIC14.44□□□□□ -0.1
CACNA1BQ00975 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 AC084752.1-201ENST00000509766 622 ntBASIC14.44□□□□□ -0.1
CACNA1BQ00975 AC026410.3-201ENST00000514280 936 ntBASIC14.44□□□□□ -0.1
CACNA1BQ00975 TMCO5B-205ENST00000530020 894 ntBASIC14.44□□□□□ -0.1
CACNA1BQ00975 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 AC005632.3-201ENST00000605544 308 ntBASIC14.44□□□□□ -0.1
CACNA1BQ00975 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CACNA1BQ00975 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CACNA1BQ00975 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CACNA1BQ00975 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CACNA1BQ00975 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CACNA1BQ00975 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CACNA1BQ00975 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CACNA1BQ00975 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CACNA1BQ00975 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 AL627231.1-201ENST00000394467 1125 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 AL512324.3-201ENST00000619383 882 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 FAM90A7P-201ENST00000382628 1395 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 FAM90A23P-201ENST00000400136 1395 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 FAM90A21P-201ENST00000510875 1396 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 FAM90A15P-201ENST00000514465 1395 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 FAM90A6P-201ENST00000515148 1394 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 FAM90A16P-201ENST00000526662 1395 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 FAM90A9P-201ENST00000527940 1395 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 FAM90A5P-201ENST00000528738 1395 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 FAM90A14P-201ENST00000530386 1395 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 FAM90A13P-201ENST00000534703 1395 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 AC006277.1-201ENST00000624348 1610 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 NHP2P1-201ENST00000335274 462 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 BX088651.3-201ENST00000418155 352 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 RN7SL67P-201ENST00000492147 296 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 AC005740.2-201ENST00000511085 419 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 AP003398.1-201ENST00000531124 318 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 AC068587.8-201ENST00000641239 219 ntBASIC14.43□□□□□ -0.1
CACNA1BQ00975 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CACNA1BQ00975 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.43□□□□□ -0.1
CACNA1BQ00975 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms