Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
USP46P62068 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
USP46P62068 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.68■□□□□ 0.26
USP46P62068 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
USP46P62068 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
USP46P62068 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
USP46P62068 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
USP46P62068 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.67■□□□□ 0.26
USP46P62068 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP46P62068 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP46P62068 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
USP46P62068 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
USP46P62068 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
USP46P62068 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP46P62068 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP46P62068 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.67■□□□□ 0.26
USP46P62068 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
USP46P62068 AC087499.6-201ENST00000411576 835 ntBASIC16.67■□□□□ 0.26
USP46P62068 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.67■□□□□ 0.26
USP46P62068 MEIS3P1-201ENST00000495167 958 ntBASIC16.67■□□□□ 0.26
USP46P62068 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.67■□□□□ 0.26
USP46P62068 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
USP46P62068 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.67■□□□□ 0.26
USP46P62068 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.67■□□□□ 0.26
USP46P62068 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.67■□□□□ 0.26
USP46P62068 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.67■□□□□ 0.26
USP46P62068 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.67■□□□□ 0.26
USP46P62068 AL450472.2-201ENST00000603663 1156 ntBASIC16.67■□□□□ 0.26
USP46P62068 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.67■□□□□ 0.26
USP46P62068 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP46P62068 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.67■□□□□ 0.26
USP46P62068 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.67■□□□□ 0.26
USP46P62068 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
USP46P62068 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP46P62068 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
USP46P62068 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.67■□□□□ 0.26
USP46P62068 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
USP46P62068 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.67■□□□□ 0.26
USP46P62068 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
USP46P62068 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.66■□□□□ 0.26
USP46P62068 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
USP46P62068 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.66■□□□□ 0.26
USP46P62068 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.66■□□□□ 0.26
USP46P62068 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.66■□□□□ 0.26
USP46P62068 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 TCAF2P1-201ENST00000291129 2421 ntBASIC16.66■□□□□ 0.26
USP46P62068 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.66■□□□□ 0.26
USP46P62068 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
USP46P62068 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.66■□□□□ 0.26
USP46P62068 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.66■□□□□ 0.26
USP46P62068 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 AC097359.3-201ENST00000603982 1210 ntBASIC16.66■□□□□ 0.26
USP46P62068 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.66■□□□□ 0.26
USP46P62068 MIR8072-201ENST00000614241 80 ntBASIC16.66■□□□□ 0.26
USP46P62068 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
USP46P62068 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.66■□□□□ 0.26
USP46P62068 AC063926.2-201ENST00000623766 1308 ntBASIC16.66■□□□□ 0.26
USP46P62068 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
USP46P62068 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
USP46P62068 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USP46P62068 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
USP46P62068 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP46P62068 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
USP46P62068 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
USP46P62068 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP46P62068 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.65■□□□□ 0.26
USP46P62068 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP46P62068 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP46P62068 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP46P62068 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP46P62068 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
USP46P62068 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
USP46P62068 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
USP46P62068 AC136604.1-201ENST00000418535 575 ntBASIC16.65■□□□□ 0.26
USP46P62068 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.65■□□□□ 0.26
USP46P62068 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
USP46P62068 MTND2P7-201ENST00000521337 640 ntBASIC16.65■□□□□ 0.26
USP46P62068 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.65■□□□□ 0.26
USP46P62068 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.65■□□□□ 0.26
USP46P62068 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.65■□□□□ 0.26
USP46P62068 CTBP2P3-201ENST00000585629 1255 ntBASIC16.65■□□□□ 0.26
USP46P62068 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.65■□□□□ 0.26
USP46P62068 AL391069.4-201ENST00000609583 481 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms