Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH13P55290 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH13P55290 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH13P55290 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH13P55290 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDH13P55290 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH13P55290 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CDH13P55290 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH13P55290 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH13P55290 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH13P55290 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH13P55290 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH13P55290 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDH13P55290 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH13P55290 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CDH13P55290 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH13P55290 RPS8P6-201ENST00000426177 609 ntBASIC15.53■□□□□ 0.08
CDH13P55290 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH13P55290 RN7SL589P-201ENST00000481268 310 ntBASIC15.53■□□□□ 0.08
CDH13P55290 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 AC079140.1-201ENST00000508039 487 ntBASIC15.53■□□□□ 0.08
CDH13P55290 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH13P55290 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH13P55290 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH13P55290 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH13P55290 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.53■□□□□ 0.08
CDH13P55290 AC026120.1-201ENST00000611536 926 ntBASIC15.53■□□□□ 0.08
CDH13P55290 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
CDH13P55290 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH13P55290 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH13P55290 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDH13P55290 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH13P55290 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH13P55290 AC127383.1-201ENST00000444697 1800 ntBASIC15.52■□□□□ 0.08
CDH13P55290 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH13P55290 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CDH13P55290 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH13P55290 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH13P55290 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CDH13P55290 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH13P55290 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH13P55290 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH13P55290 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CDH13P55290 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH13P55290 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH13P55290 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH13P55290 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.52■□□□□ 0.08
CDH13P55290 TIMM8BP1-201ENST00000452384 211 ntBASIC15.52■□□□□ 0.08
CDH13P55290 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.52■□□□□ 0.08
CDH13P55290 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH13P55290 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH13P55290 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH13P55290 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH13P55290 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH13P55290 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CDH13P55290 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CDH13P55290 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH13P55290 CYP4F24P-201ENST00000586049 1580 ntBASIC15.52■□□□□ 0.07
CDH13P55290 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH13P55290 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CDH13P55290 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH13P55290 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH13P55290 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH13P55290 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CDH13P55290 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.52■□□□□ 0.07
CDH13P55290 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms