Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNA3P52797 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNA3P52797 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNA3P52797 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
EFNA3P52797 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 NME2P1-201ENST00000426182 414 ntBASIC14.79□□□□□ -0.04
EFNA3P52797 AC005034.1-201ENST00000426657 489 ntBASIC14.79□□□□□ -0.04
EFNA3P52797 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNA3P52797 AL391825.1-201ENST00000457671 1364 ntBASIC14.79□□□□□ -0.04
EFNA3P52797 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNA3P52797 SLED1-202ENST00000512051 380 ntBASIC14.79□□□□□ -0.04
EFNA3P52797 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNA3P52797 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNA3P52797 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNA3P52797 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNA3P52797 TIMM17BP1-201ENST00000545713 516 ntBASIC14.79□□□□□ -0.04
EFNA3P52797 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 AC123567.1-201ENST00000548294 1261 ntBASIC14.79□□□□□ -0.04
EFNA3P52797 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNA3P52797 RARRES2P5-201ENST00000564013 466 ntBASIC14.79□□□□□ -0.04
EFNA3P52797 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNA3P52797 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.79□□□□□ -0.04
EFNA3P52797 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNA3P52797 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
EFNA3P52797 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNA3P52797 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 AP003680.1-201ENST00000598970 3660 ntBASIC14.79□□□□□ -0.04
EFNA3P52797 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNA3P52797 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
EFNA3P52797 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA3P52797 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
EFNA3P52797 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA3P52797 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 TOMM22P5-201ENST00000416399 439 ntBASIC14.78□□□□□ -0.04
EFNA3P52797 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA3P52797 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA3P52797 GAPDHP21-201ENST00000450301 1010 ntBASIC14.78□□□□□ -0.04
EFNA3P52797 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.78□□□□□ -0.04
EFNA3P52797 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNA3P52797 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EFNA3P52797 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EFNA3P52797 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
EFNA3P52797 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
EFNA3P52797 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNA3P52797 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.77□□□□□ -0.04
EFNA3P52797 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA3P52797 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA3P52797 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
EFNA3P52797 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA3P52797 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA3P52797 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA3P52797 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.77□□□□□ -0.04
EFNA3P52797 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.77□□□□□ -0.04
EFNA3P52797 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
EFNA3P52797 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA3P52797 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNA3P52797 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.77□□□□□ -0.04
EFNA3P52797 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms