Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.56■□□□□ 0.56
NEDD4P46934 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
NEDD4P46934 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.56■□□□□ 0.56
NEDD4P46934 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEDD4P46934 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.56■□□□□ 0.56
NEDD4P46934 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.56■□□□□ 0.56
NEDD4P46934 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.56■□□□□ 0.56
NEDD4P46934 AC004233.3-201ENST00000607794 1269 ntBASIC18.56■□□□□ 0.56
NEDD4P46934 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.56■□□□□ 0.56
NEDD4P46934 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.56■□□□□ 0.56
NEDD4P46934 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NEDD4P46934 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEDD4P46934 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEDD4P46934 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEDD4P46934 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.56■□□□□ 0.56
NEDD4P46934 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEDD4P46934 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.56■□□□□ 0.56
NEDD4P46934 AC011270.2-201ENST00000624293 2550 ntBASIC18.56■□□□□ 0.56
NEDD4P46934 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEDD4P46934 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.56■□□□□ 0.56
NEDD4P46934 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEDD4P46934 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NEDD4P46934 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NEDD4P46934 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NEDD4P46934 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.56■□□□□ 0.56
NEDD4P46934 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.55■□□□□ 0.56
NEDD4P46934 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 API5-211ENST00000534695 560 ntTSL 5 BASIC18.55■□□□□ 0.56
NEDD4P46934 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.55■□□□□ 0.56
NEDD4P46934 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.55■□□□□ 0.56
NEDD4P46934 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
NEDD4P46934 WASH4P-201ENST00000564273 1246 ntBASIC18.55■□□□□ 0.56
NEDD4P46934 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 AL121723.1-201ENST00000445194 1519 ntBASIC18.55■□□□□ 0.56
NEDD4P46934 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.55■□□□□ 0.56
NEDD4P46934 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 SLC7A15P-201ENST00000424028 1363 ntBASIC18.55■□□□□ 0.56
NEDD4P46934 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NEDD4P46934 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 AC007541.1-201ENST00000570282 1469 ntBASIC18.55■□□□□ 0.56
NEDD4P46934 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.55■□□□□ 0.56
NEDD4P46934 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NEDD4P46934 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NEDD4P46934 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NEDD4P46934 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NEDD4P46934 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEDD4P46934 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEDD4P46934 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.54■□□□□ 0.56
NEDD4P46934 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NEDD4P46934 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.54■□□□□ 0.56
NEDD4P46934 AC093004.1-201ENST00000508850 424 ntBASIC18.54■□□□□ 0.56
NEDD4P46934 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.54■□□□□ 0.56
NEDD4P46934 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.54■□□□□ 0.56
NEDD4P46934 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NEDD4P46934 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NEDD4P46934 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.54■□□□□ 0.56
NEDD4P46934 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.54■□□□□ 0.56
NEDD4P46934 AC090616.6-203ENST00000579186 1945 ntBASIC18.54■□□□□ 0.56
NEDD4P46934 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.54■□□□□ 0.56
NEDD4P46934 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.54■□□□□ 0.56
NEDD4P46934 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NEDD4P46934 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEDD4P46934 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NEDD4P46934 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.54■□□□□ 0.56
NEDD4P46934 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.54■□□□□ 0.56
NEDD4P46934 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.54■□□□□ 0.56
NEDD4P46934 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NEDD4P46934 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
NEDD4P46934 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NEDD4P46934 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
NEDD4P46934 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
NEDD4P46934 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.53■□□□□ 0.56
NEDD4P46934 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.53■□□□□ 0.56
NEDD4P46934 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.53■□□□□ 0.56
NEDD4P46934 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.53■□□□□ 0.56
NEDD4P46934 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.53■□□□□ 0.56
NEDD4P46934 CHCHD2P3-201ENST00000603038 451 ntBASIC18.53■□□□□ 0.56
NEDD4P46934 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.53■□□□□ 0.56
NEDD4P46934 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NEDD4P46934 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms