Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC022210.1-201ENST00000449856 793 ntBASIC18.15■□□□□ 0.5
BMP3P12645 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BMP3P12645 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.15■□□□□ 0.5
BMP3P12645 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BMP3P12645 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.15■□□□□ 0.5
BMP3P12645 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.15■□□□□ 0.5
BMP3P12645 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BMP3P12645 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BMP3P12645 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
BMP3P12645 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BMP3P12645 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BMP3P12645 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BMP3P12645 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.15■□□□□ 0.5
BMP3P12645 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.15■□□□□ 0.5
BMP3P12645 AC018665.1-201ENST00000622927 1362 ntBASIC18.15■□□□□ 0.5
BMP3P12645 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BMP3P12645 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BMP3P12645 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BMP3P12645 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.14■□□□□ 0.5
BMP3P12645 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.14■□□□□ 0.5
BMP3P12645 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
BMP3P12645 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
BMP3P12645 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
BMP3P12645 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
BMP3P12645 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.14■□□□□ 0.49
BMP3P12645 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 MIR658-201ENST00000385210 100 ntBASIC18.14■□□□□ 0.49
BMP3P12645 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 AC234783.1-201ENST00000441761 496 ntBASIC18.14■□□□□ 0.49
BMP3P12645 CROCCP4-201ENST00000457096 498 ntBASIC18.14■□□□□ 0.49
BMP3P12645 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.14■□□□□ 0.49
BMP3P12645 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
BMP3P12645 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.14■□□□□ 0.49
BMP3P12645 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.14■□□□□ 0.49
BMP3P12645 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
BMP3P12645 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.14■□□□□ 0.49
BMP3P12645 CLUHP6-201ENST00000580789 941 ntBASIC18.14■□□□□ 0.49
BMP3P12645 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.14■□□□□ 0.49
BMP3P12645 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.14■□□□□ 0.49
BMP3P12645 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.14■□□□□ 0.49
BMP3P12645 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.14■□□□□ 0.49
BMP3P12645 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.14■□□□□ 0.49
BMP3P12645 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
BMP3P12645 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BMP3P12645 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
BMP3P12645 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
BMP3P12645 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
BMP3P12645 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.13■□□□□ 0.49
BMP3P12645 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BMP3P12645 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BMP3P12645 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BMP3P12645 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BMP3P12645 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
BMP3P12645 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.13■□□□□ 0.49
BMP3P12645 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
BMP3P12645 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BMP3P12645 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.13■□□□□ 0.49
BMP3P12645 KRT43P-201ENST00000434019 910 ntBASIC18.13■□□□□ 0.49
BMP3P12645 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
BMP3P12645 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BMP3P12645 PTP4A1P2-201ENST00000546033 454 ntBASIC18.13■□□□□ 0.49
BMP3P12645 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.13■□□□□ 0.49
BMP3P12645 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.13■□□□□ 0.49
BMP3P12645 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.13■□□□□ 0.49
BMP3P12645 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.13■□□□□ 0.49
BMP3P12645 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.13■□□□□ 0.49
BMP3P12645 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.13■□□□□ 0.49
BMP3P12645 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.13■□□□□ 0.49
BMP3P12645 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BMP3P12645 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
BMP3P12645 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.13■□□□□ 0.49
BMP3P12645 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BMP3P12645 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BMP3P12645 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BMP3P12645 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BMP3P12645 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BMP3P12645 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BMP3P12645 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BMP3P12645 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BMP3P12645 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
BMP3P12645 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
BMP3P12645 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms