Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.71■□□□□ 0.43
GGPS1O95749 AC011477.6-201ENST00000604980 1927 ntBASIC17.71■□□□□ 0.43
GGPS1O95749 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.71■□□□□ 0.43
GGPS1O95749 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.71■□□□□ 0.43
GGPS1O95749 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
GGPS1O95749 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.71■□□□□ 0.43
GGPS1O95749 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.71■□□□□ 0.43
GGPS1O95749 AC022210.1-201ENST00000449856 793 ntBASIC17.71■□□□□ 0.43
GGPS1O95749 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
GGPS1O95749 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.71■□□□□ 0.43
GGPS1O95749 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.71■□□□□ 0.43
GGPS1O95749 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.71■□□□□ 0.43
GGPS1O95749 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.71■□□□□ 0.43
GGPS1O95749 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.71■□□□□ 0.43
GGPS1O95749 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.71■□□□□ 0.43
GGPS1O95749 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
GGPS1O95749 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
GGPS1O95749 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.71■□□□□ 0.43
GGPS1O95749 AL162727.3-201ENST00000635661 2787 ntBASIC17.71■□□□□ 0.43
GGPS1O95749 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.71■□□□□ 0.43
GGPS1O95749 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.71■□□□□ 0.43
GGPS1O95749 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.71■□□□□ 0.43
GGPS1O95749 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GGPS1O95749 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GGPS1O95749 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
GGPS1O95749 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
GGPS1O95749 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.71■□□□□ 0.42
GGPS1O95749 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
GGPS1O95749 INTS4P2-202ENST00000614726 2019 ntBASIC17.71■□□□□ 0.42
GGPS1O95749 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.7■□□□□ 0.42
GGPS1O95749 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GGPS1O95749 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.7■□□□□ 0.42
GGPS1O95749 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GGPS1O95749 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GGPS1O95749 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GGPS1O95749 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.7■□□□□ 0.42
GGPS1O95749 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.7■□□□□ 0.42
GGPS1O95749 AC134915.1-201ENST00000426461 574 ntBASIC17.7■□□□□ 0.42
GGPS1O95749 AC234783.1-201ENST00000441761 496 ntBASIC17.7■□□□□ 0.42
GGPS1O95749 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.7■□□□□ 0.42
GGPS1O95749 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.7■□□□□ 0.42
GGPS1O95749 CROCCP4-201ENST00000457096 498 ntBASIC17.7■□□□□ 0.42
GGPS1O95749 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GGPS1O95749 USP32P1-208ENST00000506594 1164 ntBASIC17.7■□□□□ 0.42
GGPS1O95749 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.7■□□□□ 0.42
GGPS1O95749 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 AL049840.4-201ENST00000602422 811 ntBASIC17.7■□□□□ 0.42
GGPS1O95749 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GGPS1O95749 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GGPS1O95749 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GGPS1O95749 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GGPS1O95749 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GGPS1O95749 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GGPS1O95749 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GGPS1O95749 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.7■□□□□ 0.42
GGPS1O95749 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.69■□□□□ 0.42
GGPS1O95749 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
GGPS1O95749 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 AL121723.1-201ENST00000445194 1519 ntBASIC17.69■□□□□ 0.42
GGPS1O95749 PCDHA1-201ENST00000378133 2726 ntBASIC17.69■□□□□ 0.42
GGPS1O95749 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.69■□□□□ 0.42
GGPS1O95749 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 VDAC1P7-201ENST00000462417 847 ntBASIC17.69■□□□□ 0.42
GGPS1O95749 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.69■□□□□ 0.42
GGPS1O95749 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.69■□□□□ 0.42
GGPS1O95749 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.69■□□□□ 0.42
GGPS1O95749 AC124283.3-201ENST00000570869 594 ntBASIC17.69■□□□□ 0.42
GGPS1O95749 BTNL10-201ENST00000595971 695 ntBASIC17.69■□□□□ 0.42
GGPS1O95749 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.69■□□□□ 0.42
GGPS1O95749 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.69■□□□□ 0.42
GGPS1O95749 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms