Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CACNA1FO60840 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 AC148477.4-201ENST00000613430 1793 ntBASIC19.56■□□□□ 0.72
CACNA1FO60840 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CACNA1FO60840 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CACNA1FO60840 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CACNA1FO60840 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1FO60840 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1FO60840 AC112492.5-201ENST00000421897 457 ntBASIC19.55■□□□□ 0.72
CACNA1FO60840 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.55■□□□□ 0.72
CACNA1FO60840 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 KRT90P-201ENST00000549264 1064 ntBASIC19.55■□□□□ 0.72
CACNA1FO60840 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.55■□□□□ 0.72
CACNA1FO60840 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.55■□□□□ 0.72
CACNA1FO60840 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CACNA1FO60840 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.55■□□□□ 0.72
CACNA1FO60840 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CACNA1FO60840 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CACNA1FO60840 AL138799.1-201ENST00000448213 1675 ntBASIC19.55■□□□□ 0.72
CACNA1FO60840 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
CACNA1FO60840 ANKRD19P-201ENST00000338192 862 ntBASIC19.55■□□□□ 0.72
CACNA1FO60840 NUS1P3-201ENST00000423502 862 ntBASIC19.55■□□□□ 0.72
CACNA1FO60840 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CACNA1FO60840 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.55■□□□□ 0.72
CACNA1FO60840 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.55■□□□□ 0.72
CACNA1FO60840 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.55■□□□□ 0.72
CACNA1FO60840 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.55■□□□□ 0.72
CACNA1FO60840 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.55■□□□□ 0.72
CACNA1FO60840 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CACNA1FO60840 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CACNA1FO60840 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1FO60840 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.55■□□□□ 0.72
CACNA1FO60840 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.54■□□□□ 0.72
CACNA1FO60840 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
CACNA1FO60840 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CACNA1FO60840 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1FO60840 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
CACNA1FO60840 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.54■□□□□ 0.72
CACNA1FO60840 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CACNA1FO60840 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1FO60840 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CACNA1FO60840 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1FO60840 RPL7P3-201ENST00000441388 714 ntBASIC19.54■□□□□ 0.72
CACNA1FO60840 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CACNA1FO60840 AP005482.1-201ENST00000563722 1273 ntBASIC19.54■□□□□ 0.72
CACNA1FO60840 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1FO60840 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.54■□□□□ 0.72
CACNA1FO60840 BX539320.1-201ENST00000623759 877 ntBASIC19.54■□□□□ 0.72
CACNA1FO60840 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CACNA1FO60840 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1FO60840 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1FO60840 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CACNA1FO60840 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1FO60840 AL109954.1-202ENST00000564051 2148 ntBASIC19.54■□□□□ 0.72
CACNA1FO60840 AL139384.1-201ENST00000612143 3047 ntBASIC19.54■□□□□ 0.72
CACNA1FO60840 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.54■□□□□ 0.72
CACNA1FO60840 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
CACNA1FO60840 PRAL-201ENST00000624952 3286 ntBASIC19.54■□□□□ 0.72
CACNA1FO60840 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1FO60840 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CACNA1FO60840 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.53■□□□□ 0.72
CACNA1FO60840 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CACNA1FO60840 GPR53P-205ENST00000457298 1084 ntBASIC19.53■□□□□ 0.72
CACNA1FO60840 RN7SL752P-201ENST00000463779 287 ntBASIC19.53■□□□□ 0.72
CACNA1FO60840 AP003171.2-201ENST00000528208 925 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms