Protein–RNA interactions for Protein: D6RBQ6

USP17L17, Ubiquitin carboxyl-terminal hydrolase 17-like protein 17, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L17D6RBQ6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 AL355864.2-201ENST00000447420 863 ntBASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 CLUHP6-201ENST00000580789 941 ntBASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP17L17D6RBQ6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 AC018695.7-201ENST00000624587 2492 ntBASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
USP17L17D6RBQ6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 AL607033.1-201ENST00000623900 1599 ntBASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 AC099336.1-201ENST00000417053 1171 ntBASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 RPL7P3-201ENST00000441388 714 ntBASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 AC000095.1-201ENST00000603208 874 ntBASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP17L17D6RBQ6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 AC092933.1-201ENST00000393644 945 ntBASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 BAATP1-201ENST00000412284 1225 ntBASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.25■□□□□ 0.51
USP17L17D6RBQ6 ACTBP11-201ENST00000436287 1126 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms