Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 KRT8P37-201ENST00000451609 1420 ntBASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP3Q9BWW4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SSBP3Q9BWW4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 PIN1P1-201ENST00000412108 996 ntBASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 AC104794.3-201ENST00000566840 1248 ntBASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 AC004840.1-201ENST00000636359 365 ntBASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.27□□□□□ -0.29
SSBP3Q9BWW4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 MIR648-201ENST00000385046 94 ntBASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 SPTLC1P1-201ENST00000447199 261 ntBASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.26□□□□□ -0.29
SSBP3Q9BWW4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms