Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.83■□□□□ 0.44
USP6NLQ92738 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6NLQ92738 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP6NLQ92738 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.83■□□□□ 0.44
USP6NLQ92738 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6NLQ92738 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
USP6NLQ92738 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
USP6NLQ92738 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USP6NLQ92738 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
USP6NLQ92738 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.82■□□□□ 0.44
USP6NLQ92738 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.82■□□□□ 0.44
USP6NLQ92738 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USP6NLQ92738 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
USP6NLQ92738 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
USP6NLQ92738 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USP6NLQ92738 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 ELK2AP-201ENST00000392510 1007 ntBASIC17.82■□□□□ 0.44
USP6NLQ92738 AC092506.1-202ENST00000401022 528 ntBASIC17.82■□□□□ 0.44
USP6NLQ92738 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
USP6NLQ92738 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.82■□□□□ 0.44
USP6NLQ92738 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.82■□□□□ 0.44
USP6NLQ92738 AC104306.2-201ENST00000451877 341 ntBASIC17.82■□□□□ 0.44
USP6NLQ92738 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
USP6NLQ92738 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.82■□□□□ 0.44
USP6NLQ92738 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
USP6NLQ92738 AL008638.5-201ENST00000623814 1298 ntBASIC17.82■□□□□ 0.44
USP6NLQ92738 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
USP6NLQ92738 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
USP6NLQ92738 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USP6NLQ92738 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.82■□□□□ 0.44
USP6NLQ92738 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6NLQ92738 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP6NLQ92738 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.81■□□□□ 0.44
USP6NLQ92738 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
USP6NLQ92738 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP6NLQ92738 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 NKILA-202ENST00000614771 2598 ntBASIC17.81■□□□□ 0.44
USP6NLQ92738 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.81■□□□□ 0.44
USP6NLQ92738 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.81■□□□□ 0.44
USP6NLQ92738 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.81■□□□□ 0.44
USP6NLQ92738 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
USP6NLQ92738 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP6NLQ92738 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.81■□□□□ 0.44
USP6NLQ92738 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 Z93015.1-201ENST00000451718 390 ntBASIC17.81■□□□□ 0.44
USP6NLQ92738 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USP6NLQ92738 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 AC106872.11-201ENST00000605838 421 ntBASIC17.81■□□□□ 0.44
USP6NLQ92738 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.81■□□□□ 0.44
USP6NLQ92738 AP005019.2-201ENST00000615104 511 ntBASIC17.81■□□□□ 0.44
USP6NLQ92738 AC132938.4-201ENST00000623835 848 ntBASIC17.81■□□□□ 0.44
USP6NLQ92738 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
USP6NLQ92738 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP6NLQ92738 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6NLQ92738 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP6NLQ92738 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms