Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGB4Q8WW32 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGB4Q8WW32 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGB4Q8WW32 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGB4Q8WW32 AC106886.4-201ENST00000623557 2502 ntBASIC15.86■□□□□ 0.13
HMGB4Q8WW32 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 BAATP1-201ENST00000412284 1225 ntBASIC15.85■□□□□ 0.13
HMGB4Q8WW32 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 AL355994.2-201ENST00000447882 704 ntBASIC15.85■□□□□ 0.13
HMGB4Q8WW32 FO681548.1-201ENST00000455617 1132 ntBASIC15.85■□□□□ 0.13
HMGB4Q8WW32 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 CLUHP6-201ENST00000580789 941 ntBASIC15.85■□□□□ 0.13
HMGB4Q8WW32 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 AD000864.1-201ENST00000624076 2295 ntBASIC15.85■□□□□ 0.13
HMGB4Q8WW32 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 AC134312.5-201ENST00000568031 1313 ntBASIC15.85■□□□□ 0.13
HMGB4Q8WW32 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 MSTO2P-201ENST00000314835 1709 ntBASIC15.85■□□□□ 0.13
HMGB4Q8WW32 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGB4Q8WW32 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 AL139384.1-201ENST00000612143 3047 ntBASIC15.84■□□□□ 0.13
HMGB4Q8WW32 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 AC022211.2-201ENST00000585075 2527 ntBASIC15.84■□□□□ 0.13
HMGB4Q8WW32 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 FTH1P14-201ENST00000482930 551 ntBASIC15.84■□□□□ 0.13
HMGB4Q8WW32 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 HNRNPUP1-201ENST00000554987 333 ntBASIC15.84■□□□□ 0.13
HMGB4Q8WW32 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HMGB4Q8WW32 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGB4Q8WW32 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGB4Q8WW32 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGB4Q8WW32 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.13
HMGB4Q8WW32 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HMGB4Q8WW32 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.83■□□□□ 0.13
HMGB4Q8WW32 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGB4Q8WW32 NFIC-211ENST00000641145 8399 ntBASIC15.83■□□□□ 0.13
HMGB4Q8WW32 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGB4Q8WW32 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.83■□□□□ 0.12
HMGB4Q8WW32 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HMGB4Q8WW32 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGB4Q8WW32 AC092933.1-201ENST00000393644 945 ntBASIC15.83■□□□□ 0.12
HMGB4Q8WW32 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms