Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 AC093726.1-201ENST00000608064 963 ntBASIC17.01■□□□□ 0.31
BEST2Q8NFU1 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 AC007431.3-201ENST00000623221 587 ntBASIC17.01■□□□□ 0.31
BEST2Q8NFU1 AL158212.4-201ENST00000624062 1286 ntBASIC17.01■□□□□ 0.31
BEST2Q8NFU1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 AC018695.7-201ENST00000624587 2492 ntBASIC17.01■□□□□ 0.31
BEST2Q8NFU1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17■□□□□ 0.31
BEST2Q8NFU1 AL391005.1-201ENST00000623953 2435 ntBASIC17■□□□□ 0.31
BEST2Q8NFU1 AC138969.3-201ENST00000546612 1459 ntBASIC17■□□□□ 0.31
BEST2Q8NFU1 AC138932.2-201ENST00000548268 1459 ntBASIC17■□□□□ 0.31
BEST2Q8NFU1 AC126755.4-201ENST00000549796 1459 ntBASIC17■□□□□ 0.31
BEST2Q8NFU1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST2Q8NFU1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
BEST2Q8NFU1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17■□□□□ 0.31
BEST2Q8NFU1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17■□□□□ 0.31
BEST2Q8NFU1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17■□□□□ 0.31
BEST2Q8NFU1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17■□□□□ 0.31
BEST2Q8NFU1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17■□□□□ 0.31
BEST2Q8NFU1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17■□□□□ 0.31
BEST2Q8NFU1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17■□□□□ 0.31
BEST2Q8NFU1 AC123567.1-201ENST00000548294 1261 ntBASIC17■□□□□ 0.31
BEST2Q8NFU1 AC036164.1-201ENST00000570544 333 ntBASIC17■□□□□ 0.31
BEST2Q8NFU1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17■□□□□ 0.31
BEST2Q8NFU1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
BEST2Q8NFU1 CU639417.3-201ENST00000624240 1404 ntBASIC17■□□□□ 0.31
BEST2Q8NFU1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17■□□□□ 0.31
BEST2Q8NFU1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST2Q8NFU1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST2Q8NFU1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST2Q8NFU1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST2Q8NFU1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST2Q8NFU1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
BEST2Q8NFU1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST2Q8NFU1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST2Q8NFU1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST2Q8NFU1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 AC010491.1-201ENST00000563101 2797 ntBASIC16.99■□□□□ 0.31
BEST2Q8NFU1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 AC104596.2-201ENST00000512793 793 ntBASIC16.99■□□□□ 0.31
BEST2Q8NFU1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 AC008494.3-201ENST00000606615 944 ntBASIC16.99■□□□□ 0.31
BEST2Q8NFU1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 AC026691.1-201ENST00000602502 2017 ntBASIC16.99■□□□□ 0.31
BEST2Q8NFU1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
BEST2Q8NFU1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms