Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 AC026740.1-201ENST00000607068 791 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 PCDHA12-202ENST00000613593 2588 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 MIR33B-201ENST00000385104 96 ntBASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 TMEM198B-204ENST00000484016 896 ntBASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL27A1Q8IZC6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 FGFR3P5-201ENST00000564496 886 ntBASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 MIR4706-201ENST00000582134 82 ntBASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 NUP210P1-202ENST00000504322 710 ntBASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms