Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM53Q6P2H8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 SLC22A20-204ENST00000530038 1673 ntBASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 MTHFR-217ENST00000641820 1569 ntBASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 KRT18P3-201ENST00000451602 1288 ntBASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 HLA-J-202ENST00000469281 1241 ntBASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 AC140113.2-201ENST00000604370 208 ntBASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 AL645728.1-201ENST00000366221 2101 ntBASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 BCAR1-209ENST00000546196 1340 ntBASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM53Q6P2H8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 RHOQP3-201ENST00000437982 621 ntBASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 KRT18P58-201ENST00000527480 1120 ntBASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TMEM53Q6P2H8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TMEM53Q6P2H8 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms