Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCDC27Q2M243 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC27Q2M243 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 RPL5P21-201ENST00000404620 815 ntBASIC20.51■□□□□ 0.87
CCDC27Q2M243 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.51■□□□□ 0.87
CCDC27Q2M243 DOC2GP-202ENST00000514950 1163 ntBASIC20.51■□□□□ 0.87
CCDC27Q2M243 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 RARRES2P5-201ENST00000564013 466 ntBASIC20.51■□□□□ 0.87
CCDC27Q2M243 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 PPT1-215ENST00000641471 2368 ntBASIC20.51■□□□□ 0.87
CCDC27Q2M243 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCDC27Q2M243 AC092384.3-202ENST00000564646 2873 ntBASIC20.51■□□□□ 0.87
CCDC27Q2M243 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC27Q2M243 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC27Q2M243 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC27Q2M243 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC27Q2M243 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 HMGN1P19-201ENST00000436976 333 ntBASIC20.5■□□□□ 0.87
CCDC27Q2M243 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 TSPY16P-201ENST00000449843 468 ntBASIC20.5■□□□□ 0.87
CCDC27Q2M243 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 SERBP1P5-201ENST00000510079 1181 ntBASIC20.5■□□□□ 0.87
CCDC27Q2M243 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 TBCB-211ENST00000589996 724 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC27Q2M243 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC27Q2M243 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC27Q2M243 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC27Q2M243 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC27Q2M243 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 AC023310.3-201ENST00000557027 670 ntBASIC20.49■□□□□ 0.87
CCDC27Q2M243 AC100756.1-201ENST00000562736 682 ntBASIC20.49■□□□□ 0.87
CCDC27Q2M243 RRP7BP-205ENST00000566851 833 ntBASIC20.49■□□□□ 0.87
CCDC27Q2M243 AC138749.3-201ENST00000567691 622 ntBASIC20.49■□□□□ 0.87
CCDC27Q2M243 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 AC011467.4-201ENST00000594891 528 ntBASIC20.49■□□□□ 0.87
CCDC27Q2M243 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 AC099568.2-201ENST00000609194 695 ntBASIC20.49■□□□□ 0.87
CCDC27Q2M243 AC116165.1-201ENST00000611806 668 ntBASIC20.49■□□□□ 0.87
CCDC27Q2M243 CROCCP1-201ENST00000426910 5675 ntBASIC20.49■□□□□ 0.87
CCDC27Q2M243 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC27Q2M243 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC27Q2M243 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms