Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.39■□□□□ 0.69
DDR1Q08345 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 COX5BP1-201ENST00000507622 393 ntBASIC19.39■□□□□ 0.69
DDR1Q08345 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.39■□□□□ 0.69
DDR1Q08345 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.39■□□□□ 0.69
DDR1Q08345 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
DDR1Q08345 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.39■□□□□ 0.69
DDR1Q08345 MIR4313-201ENST00000580760 101 ntBASIC19.39■□□□□ 0.69
DDR1Q08345 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDR1Q08345 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.39■□□□□ 0.69
DDR1Q08345 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
DDR1Q08345 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDR1Q08345 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDR1Q08345 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.38■□□□□ 0.69
DDR1Q08345 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDR1Q08345 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDR1Q08345 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDR1Q08345 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDR1Q08345 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
DDR1Q08345 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDR1Q08345 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.38■□□□□ 0.69
DDR1Q08345 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
DDR1Q08345 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.38■□□□□ 0.69
DDR1Q08345 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
DDR1Q08345 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDR1Q08345 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.38■□□□□ 0.69
DDR1Q08345 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.38■□□□□ 0.69
DDR1Q08345 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.38■□□□□ 0.69
DDR1Q08345 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.38■□□□□ 0.69
DDR1Q08345 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDR1Q08345 AP003171.2-201ENST00000528208 925 ntBASIC19.38■□□□□ 0.69
DDR1Q08345 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.38■□□□□ 0.69
DDR1Q08345 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.38■□□□□ 0.69
DDR1Q08345 FGFR3P5-201ENST00000564496 886 ntBASIC19.38■□□□□ 0.69
DDR1Q08345 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.38■□□□□ 0.69
DDR1Q08345 RN7SL574P-201ENST00000581512 297 ntBASIC19.38■□□□□ 0.69
DDR1Q08345 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.38■□□□□ 0.69
DDR1Q08345 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.38■□□□□ 0.69
DDR1Q08345 AC244157.2-201ENST00000616239 1006 ntBASIC19.38■□□□□ 0.69
DDR1Q08345 ENPP7P14-201ENST00000621765 1040 ntBASIC19.38■□□□□ 0.69
DDR1Q08345 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.38■□□□□ 0.69
DDR1Q08345 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.38■□□□□ 0.69
DDR1Q08345 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DDR1Q08345 PRSS30P-206ENST00000641773 873 ntBASIC19.38■□□□□ 0.69
DDR1Q08345 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
DDR1Q08345 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
DDR1Q08345 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 MIR769-201ENST00000390225 118 ntBASIC19.37■□□□□ 0.69
DDR1Q08345 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DDR1Q08345 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.37■□□□□ 0.69
DDR1Q08345 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.37■□□□□ 0.69
DDR1Q08345 PPY2P-201ENST00000582808 702 ntBASIC19.37■□□□□ 0.69
DDR1Q08345 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.37■□□□□ 0.69
DDR1Q08345 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
DDR1Q08345 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.37■□□□□ 0.69
DDR1Q08345 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.37■□□□□ 0.69
DDR1Q08345 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
DDR1Q08345 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
DDR1Q08345 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.37■□□□□ 0.69
DDR1Q08345 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
DDR1Q08345 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDR1Q08345 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDR1Q08345 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
DDR1Q08345 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDR1Q08345 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDR1Q08345 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC19.36■□□□□ 0.69
DDR1Q08345 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDR1Q08345 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDR1Q08345 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDR1Q08345 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDR1Q08345 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.36■□□□□ 0.69
DDR1Q08345 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.36■□□□□ 0.69
DDR1Q08345 TUBBP5-203ENST00000508529 1334 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms