Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.18■□□□□ 0.34
PDE6CP51160 MIR4453-201ENST00000584019 89 ntBASIC17.18■□□□□ 0.34
PDE6CP51160 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.18■□□□□ 0.34
PDE6CP51160 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6CP51160 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6CP51160 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6CP51160 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6CP51160 AL390955.2-201ENST00000603032 514 ntBASIC17.18■□□□□ 0.34
PDE6CP51160 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.18■□□□□ 0.34
PDE6CP51160 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.18■□□□□ 0.34
PDE6CP51160 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6CP51160 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6CP51160 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6CP51160 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6CP51160 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6CP51160 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6CP51160 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6CP51160 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6CP51160 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PDE6CP51160 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6CP51160 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6CP51160 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6CP51160 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6CP51160 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6CP51160 FO538757.1-201ENST00000623083 1397 ntBASIC17.17■□□□□ 0.34
PDE6CP51160 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PDE6CP51160 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6CP51160 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6CP51160 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6CP51160 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PDE6CP51160 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PDE6CP51160 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.17■□□□□ 0.34
PDE6CP51160 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.17■□□□□ 0.34
PDE6CP51160 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6CP51160 TREML5P-201ENST00000421694 576 ntBASIC17.17■□□□□ 0.34
PDE6CP51160 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.17■□□□□ 0.34
PDE6CP51160 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.17■□□□□ 0.34
PDE6CP51160 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.17■□□□□ 0.34
PDE6CP51160 AL512638.1-201ENST00000457493 794 ntBASIC17.17■□□□□ 0.34
PDE6CP51160 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.17■□□□□ 0.34
PDE6CP51160 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6CP51160 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.17■□□□□ 0.34
PDE6CP51160 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6CP51160 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6CP51160 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6CP51160 AL691432.1-201ENST00000596308 1422 ntBASIC17.17■□□□□ 0.34
PDE6CP51160 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PDE6CP51160 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
PDE6CP51160 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6CP51160 AC126177.1-201ENST00000547829 2218 ntBASIC17.17■□□□□ 0.34
PDE6CP51160 NORAD-201ENST00000565493 5339 ntBASIC17.17■□□□□ 0.34
PDE6CP51160 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6CP51160 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.16■□□□□ 0.34
PDE6CP51160 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PDE6CP51160 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.16■□□□□ 0.34
PDE6CP51160 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PDE6CP51160 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PDE6CP51160 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.16■□□□□ 0.34
PDE6CP51160 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.16■□□□□ 0.34
PDE6CP51160 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.16■□□□□ 0.34
PDE6CP51160 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.16■□□□□ 0.34
PDE6CP51160 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.16■□□□□ 0.34
PDE6CP51160 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.16■□□□□ 0.34
PDE6CP51160 MIR4745-201ENST00000577608 62 ntBASIC17.16■□□□□ 0.34
PDE6CP51160 AC003101.2-201ENST00000612557 442 ntBASIC17.16■□□□□ 0.34
PDE6CP51160 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.16■□□□□ 0.34
PDE6CP51160 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDE6CP51160 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
PDE6CP51160 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.16■□□□□ 0.34
PDE6CP51160 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
PDE6CP51160 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PDE6CP51160 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDE6CP51160 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6CP51160 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6CP51160 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6CP51160 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.15■□□□□ 0.34
PDE6CP51160 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6CP51160 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
PDE6CP51160 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6CP51160 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDE6CP51160 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.15■□□□□ 0.34
PDE6CP51160 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms