Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL15A1P39059 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
COL15A1P39059 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.85■□□□□ 0.77
COL15A1P39059 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
COL15A1P39059 AC007969.1-201ENST00000433675 447 ntBASIC19.85■□□□□ 0.77
COL15A1P39059 AL590640.2-201ENST00000457038 527 ntBASIC19.85■□□□□ 0.77
COL15A1P39059 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.85■□□□□ 0.77
COL15A1P39059 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.85■□□□□ 0.77
COL15A1P39059 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.85■□□□□ 0.77
COL15A1P39059 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.85■□□□□ 0.77
COL15A1P39059 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.85■□□□□ 0.77
COL15A1P39059 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.85■□□□□ 0.77
COL15A1P39059 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL15A1P39059 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
COL15A1P39059 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL15A1P39059 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COL15A1P39059 AL138709.1-201ENST00000614840 1693 ntBASIC19.85■□□□□ 0.77
COL15A1P39059 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.85■□□□□ 0.77
COL15A1P39059 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.85■□□□□ 0.77
COL15A1P39059 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL15A1P39059 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.85■□□□□ 0.77
COL15A1P39059 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.85■□□□□ 0.77
COL15A1P39059 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
COL15A1P39059 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL15A1P39059 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL15A1P39059 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.84■□□□□ 0.77
COL15A1P39059 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.84■□□□□ 0.77
COL15A1P39059 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.84■□□□□ 0.77
COL15A1P39059 AC005695.3-201ENST00000614522 232 ntBASIC19.84■□□□□ 0.77
COL15A1P39059 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COL15A1P39059 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.84■□□□□ 0.77
COL15A1P39059 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.84■□□□□ 0.77
COL15A1P39059 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
COL15A1P39059 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
COL15A1P39059 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
COL15A1P39059 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL15A1P39059 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.84■□□□□ 0.77
COL15A1P39059 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.83■□□□□ 0.77
COL15A1P39059 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.83■□□□□ 0.77
COL15A1P39059 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.83■□□□□ 0.77
COL15A1P39059 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.83■□□□□ 0.77
COL15A1P39059 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.83■□□□□ 0.77
COL15A1P39059 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.83■□□□□ 0.77
COL15A1P39059 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.83■□□□□ 0.77
COL15A1P39059 AC079328.2-201ENST00000561241 3354 ntBASIC19.83■□□□□ 0.77
COL15A1P39059 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.83■□□□□ 0.77
COL15A1P39059 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
COL15A1P39059 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.83■□□□□ 0.77
COL15A1P39059 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.83■□□□□ 0.77
COL15A1P39059 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.83■□□□□ 0.77
COL15A1P39059 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL15A1P39059 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
COL15A1P39059 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL15A1P39059 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL15A1P39059 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.83■□□□□ 0.76
COL15A1P39059 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL15A1P39059 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
COL15A1P39059 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.83■□□□□ 0.76
COL15A1P39059 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
COL15A1P39059 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL15A1P39059 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms