Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PDE6BP35913 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PDE6BP35913 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PDE6BP35913 KLF2P2-201ENST00000416807 1039 ntBASIC19.32■□□□□ 0.68
PDE6BP35913 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PDE6BP35913 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.32■□□□□ 0.68
PDE6BP35913 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PDE6BP35913 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 RN7SL769P-201ENST00000469386 295 ntBASIC19.32■□□□□ 0.68
PDE6BP35913 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PDE6BP35913 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
PDE6BP35913 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PDE6BP35913 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.32■□□□□ 0.68
PDE6BP35913 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.32■□□□□ 0.68
PDE6BP35913 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.32■□□□□ 0.68
PDE6BP35913 NDUFV2P1-201ENST00000596415 907 ntBASIC19.32■□□□□ 0.68
PDE6BP35913 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.32■□□□□ 0.68
PDE6BP35913 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
PDE6BP35913 AC138627.1-207ENST00000641560 1006 ntBASIC19.32■□□□□ 0.68
PDE6BP35913 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.32■□□□□ 0.68
PDE6BP35913 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PDE6BP35913 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.32■□□□□ 0.68
PDE6BP35913 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PDE6BP35913 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.31■□□□□ 0.68
PDE6BP35913 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDE6BP35913 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PDE6BP35913 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PDE6BP35913 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PDE6BP35913 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDE6BP35913 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PDE6BP35913 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.31■□□□□ 0.68
PDE6BP35913 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 HSPB1P2-201ENST00000448722 546 ntBASIC19.31■□□□□ 0.68
PDE6BP35913 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.31■□□□□ 0.68
PDE6BP35913 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.31■□□□□ 0.68
PDE6BP35913 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.31■□□□□ 0.68
PDE6BP35913 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.31■□□□□ 0.68
PDE6BP35913 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.31■□□□□ 0.68
PDE6BP35913 AL451050.2-201ENST00000606967 682 ntBASIC19.31■□□□□ 0.68
PDE6BP35913 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.31■□□□□ 0.68
PDE6BP35913 ME2P1-201ENST00000426028 1970 ntBASIC19.31■□□□□ 0.68
PDE6BP35913 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 AC018892.3-201ENST00000623986 2499 ntBASIC19.31■□□□□ 0.68
PDE6BP35913 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.31■□□□□ 0.68
PDE6BP35913 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PDE6BP35913 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.31■□□□□ 0.68
PDE6BP35913 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6BP35913 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 AC005052.1-201ENST00000625181 2492 ntBASIC19.3■□□□□ 0.68
PDE6BP35913 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.3■□□□□ 0.68
PDE6BP35913 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.3■□□□□ 0.68
PDE6BP35913 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6BP35913 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PDE6BP35913 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6BP35913 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDE6BP35913 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PDE6BP35913 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PDE6BP35913 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.3■□□□□ 0.68
PDE6BP35913 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PDE6BP35913 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PDE6BP35913 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.29■□□□□ 0.68
PDE6BP35913 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.29■□□□□ 0.68
PDE6BP35913 KRT8P19-201ENST00000551916 1455 ntBASIC19.29■□□□□ 0.68
PDE6BP35913 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PDE6BP35913 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms