Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.36■□□□□ 0.69
TM4SF1P30408 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.36■□□□□ 0.69
TM4SF1P30408 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 MIR769-201ENST00000390225 118 ntBASIC19.36■□□□□ 0.69
TM4SF1P30408 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.36■□□□□ 0.69
TM4SF1P30408 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.36■□□□□ 0.69
TM4SF1P30408 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.36■□□□□ 0.69
TM4SF1P30408 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.36■□□□□ 0.69
TM4SF1P30408 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.36■□□□□ 0.69
TM4SF1P30408 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.36■□□□□ 0.69
TM4SF1P30408 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF1P30408 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
TM4SF1P30408 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF1P30408 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.35■□□□□ 0.69
TM4SF1P30408 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TM4SF1P30408 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.35■□□□□ 0.69
TM4SF1P30408 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF1P30408 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF1P30408 MIR648-201ENST00000385046 94 ntBASIC19.35■□□□□ 0.69
TM4SF1P30408 AC104457.1-201ENST00000401024 814 ntBASIC19.35■□□□□ 0.69
TM4SF1P30408 AL139094.1-201ENST00000405549 1188 ntBASIC19.35■□□□□ 0.69
TM4SF1P30408 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF1P30408 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.35■□□□□ 0.69
TM4SF1P30408 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.35■□□□□ 0.69
TM4SF1P30408 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 AP003171.2-201ENST00000528208 925 ntBASIC19.35■□□□□ 0.69
TM4SF1P30408 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
TM4SF1P30408 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.35■□□□□ 0.69
TM4SF1P30408 PPY2P-201ENST00000582808 702 ntBASIC19.35■□□□□ 0.69
TM4SF1P30408 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.35■□□□□ 0.69
TM4SF1P30408 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.35■□□□□ 0.69
TM4SF1P30408 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 U62317.3-201ENST00000608319 855 ntBASIC19.35■□□□□ 0.69
TM4SF1P30408 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
TM4SF1P30408 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TM4SF1P30408 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF1P30408 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TM4SF1P30408 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
TM4SF1P30408 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TM4SF1P30408 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.34■□□□□ 0.69
TM4SF1P30408 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.34■□□□□ 0.69
TM4SF1P30408 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.34■□□□□ 0.69
TM4SF1P30408 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.34■□□□□ 0.69
TM4SF1P30408 AL133466.1-201ENST00000447582 150 ntBASIC19.34■□□□□ 0.69
TM4SF1P30408 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.34■□□□□ 0.69
TM4SF1P30408 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.34■□□□□ 0.69
TM4SF1P30408 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.34■□□□□ 0.69
TM4SF1P30408 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.34■□□□□ 0.69
TM4SF1P30408 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TM4SF1P30408 AC005730.2-201ENST00000564549 1184 ntBASIC19.34■□□□□ 0.69
TM4SF1P30408 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.34■□□□□ 0.69
TM4SF1P30408 RN7SL713P-201ENST00000582127 302 ntBASIC19.34■□□□□ 0.69
TM4SF1P30408 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC19.34■□□□□ 0.69
TM4SF1P30408 AC073413.1-201ENST00000603927 732 ntBASIC19.34■□□□□ 0.69
TM4SF1P30408 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.34■□□□□ 0.69
TM4SF1P30408 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.34■□□□□ 0.69
TM4SF1P30408 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF1P30408 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF1P30408 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF1P30408 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.33■□□□□ 0.69
TM4SF1P30408 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF1P30408 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms