Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.53■□□□□ 0.4
CTGFP29279 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.53■□□□□ 0.4
CTGFP29279 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CTGFP29279 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.52■□□□□ 0.4
CTGFP29279 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.52■□□□□ 0.4
CTGFP29279 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.52■□□□□ 0.4
CTGFP29279 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.52■□□□□ 0.4
CTGFP29279 AL008707.1-201ENST00000422498 534 ntBASIC17.52■□□□□ 0.4
CTGFP29279 RNMTL1P1-201ENST00000454103 560 ntBASIC17.52■□□□□ 0.4
CTGFP29279 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.52■□□□□ 0.4
CTGFP29279 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTGFP29279 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.52■□□□□ 0.4
CTGFP29279 AC073352.2-201ENST00000609385 439 ntBASIC17.52■□□□□ 0.4
CTGFP29279 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.52■□□□□ 0.4
CTGFP29279 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CTGFP29279 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CTGFP29279 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CTGFP29279 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.52■□□□□ 0.39
CTGFP29279 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTGFP29279 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CTGFP29279 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.51■□□□□ 0.39
CTGFP29279 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.51■□□□□ 0.39
CTGFP29279 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CTGFP29279 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CTGFP29279 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.51■□□□□ 0.39
CTGFP29279 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.51■□□□□ 0.39
CTGFP29279 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.51■□□□□ 0.39
CTGFP29279 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.51■□□□□ 0.39
CTGFP29279 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.51■□□□□ 0.39
CTGFP29279 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.51■□□□□ 0.39
CTGFP29279 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.51■□□□□ 0.39
CTGFP29279 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.51■□□□□ 0.39
CTGFP29279 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.51■□□□□ 0.39
CTGFP29279 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.51■□□□□ 0.39
CTGFP29279 ZACNP1-201ENST00000612259 710 ntBASIC17.51■□□□□ 0.39
CTGFP29279 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.51■□□□□ 0.39
CTGFP29279 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CTGFP29279 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CTGFP29279 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTGFP29279 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CTGFP29279 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CTGFP29279 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.5■□□□□ 0.39
CTGFP29279 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.5■□□□□ 0.39
CTGFP29279 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.5■□□□□ 0.39
CTGFP29279 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.5■□□□□ 0.39
CTGFP29279 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.5■□□□□ 0.39
CTGFP29279 AC234782.1-201ENST00000451950 919 ntBASIC17.5■□□□□ 0.39
CTGFP29279 AC104073.2-201ENST00000453737 312 ntBASIC17.5■□□□□ 0.39
CTGFP29279 AC106820.3-201ENST00000561653 397 ntBASIC17.5■□□□□ 0.39
CTGFP29279 MIR4783-201ENST00000580343 82 ntBASIC17.5■□□□□ 0.39
CTGFP29279 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.5■□□□□ 0.39
CTGFP29279 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.5■□□□□ 0.39
CTGFP29279 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.5■□□□□ 0.39
CTGFP29279 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.5■□□□□ 0.39
CTGFP29279 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.5■□□□□ 0.39
CTGFP29279 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.5■□□□□ 0.39
CTGFP29279 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.5■□□□□ 0.39
CTGFP29279 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.5■□□□□ 0.39
CTGFP29279 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTGFP29279 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.5■□□□□ 0.39
CTGFP29279 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms