Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP8P22894 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP8P22894 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP8P22894 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP8P22894 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP8P22894 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.64■□□□□ 0.25
MMP8P22894 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MMP8P22894 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
MMP8P22894 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 AC138035.3-201ENST00000622706 2791 ntBASIC16.64■□□□□ 0.25
MMP8P22894 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP8P22894 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.64■□□□□ 0.25
MMP8P22894 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.64■□□□□ 0.25
MMP8P22894 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MMP8P22894 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP8P22894 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
MMP8P22894 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MMP8P22894 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP8P22894 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP8P22894 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.63■□□□□ 0.25
MMP8P22894 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP8P22894 AC092580.3-201ENST00000430932 139 ntBASIC16.63■□□□□ 0.25
MMP8P22894 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP8P22894 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP8P22894 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.63■□□□□ 0.25
MMP8P22894 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP8P22894 AC010336.2-201ENST00000564226 506 ntBASIC16.63■□□□□ 0.25
MMP8P22894 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP8P22894 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.63■□□□□ 0.25
MMP8P22894 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP8P22894 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP8P22894 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP8P22894 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MMP8P22894 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.63■□□□□ 0.25
MMP8P22894 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MMP8P22894 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.63■□□□□ 0.25
MMP8P22894 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MMP8P22894 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 AC023157.3-201ENST00000619086 2088 ntBASIC16.62■□□□□ 0.25
MMP8P22894 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
MMP8P22894 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MMP8P22894 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MMP8P22894 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.62■□□□□ 0.25
MMP8P22894 METTL21AP1-201ENST00000438852 635 ntBASIC16.62■□□□□ 0.25
MMP8P22894 FAM86GP-201ENST00000448322 971 ntBASIC16.62■□□□□ 0.25
MMP8P22894 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.62■□□□□ 0.25
MMP8P22894 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.62■□□□□ 0.25
MMP8P22894 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.62■□□□□ 0.25
MMP8P22894 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.62■□□□□ 0.25
MMP8P22894 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms