Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATP4AP20648 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP4AP20648 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP4AP20648 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
ATP4AP20648 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.54■□□□□ 0.4
ATP4AP20648 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.54■□□□□ 0.4
ATP4AP20648 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.54■□□□□ 0.4
ATP4AP20648 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP4AP20648 AC036164.1-201ENST00000570544 333 ntBASIC17.54■□□□□ 0.4
ATP4AP20648 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
ATP4AP20648 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.54■□□□□ 0.4
ATP4AP20648 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP4AP20648 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP4AP20648 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP4AP20648 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP4AP20648 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP4AP20648 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP4AP20648 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP4AP20648 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ATP4AP20648 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP4AP20648 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP4AP20648 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ATP4AP20648 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP4AP20648 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATP4AP20648 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
ATP4AP20648 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ATP4AP20648 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP4AP20648 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP4AP20648 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP4AP20648 TMEM14DP-201ENST00000422205 345 ntBASIC17.53■□□□□ 0.4
ATP4AP20648 AC104596.2-201ENST00000512793 793 ntBASIC17.53■□□□□ 0.4
ATP4AP20648 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP4AP20648 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP4AP20648 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP4AP20648 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP4AP20648 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.53■□□□□ 0.4
ATP4AP20648 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP4AP20648 AL033527.5-201ENST00000641382 801 ntBASIC17.53■□□□□ 0.4
ATP4AP20648 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP4AP20648 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP4AP20648 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP4AP20648 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP4AP20648 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP4AP20648 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
ATP4AP20648 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
ATP4AP20648 AL121723.1-201ENST00000445194 1519 ntBASIC17.52■□□□□ 0.4
ATP4AP20648 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP4AP20648 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ATP4AP20648 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ATP4AP20648 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP4AP20648 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.52■□□□□ 0.4
ATP4AP20648 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP4AP20648 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP4AP20648 AC011495.1-201ENST00000498085 584 ntBASIC17.52■□□□□ 0.4
ATP4AP20648 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.52■□□□□ 0.4
ATP4AP20648 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP4AP20648 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP4AP20648 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
ATP4AP20648 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP4AP20648 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP4AP20648 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP4AP20648 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP4AP20648 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
ATP4AP20648 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP4AP20648 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP4AP20648 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP4AP20648 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP4AP20648 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.52■□□□□ 0.39
ATP4AP20648 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP4AP20648 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms