Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ERCC2P18074 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.31■□□□□ 0.2
ERCC2P18074 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.31■□□□□ 0.2
ERCC2P18074 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ERCC2P18074 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.3■□□□□ 0.2
ERCC2P18074 AC009090.5-201ENST00000624886 2285 ntBASIC16.3■□□□□ 0.2
ERCC2P18074 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC2P18074 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC2P18074 AC087499.5-201ENST00000452760 1342 ntBASIC16.3■□□□□ 0.2
ERCC2P18074 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ERCC2P18074 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC2P18074 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC2P18074 AC055876.3-201ENST00000431496 288 ntBASIC16.3■□□□□ 0.2
ERCC2P18074 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC2P18074 RFPL4AP1-201ENST00000530883 850 ntBASIC16.3■□□□□ 0.2
ERCC2P18074 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC2P18074 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.3■□□□□ 0.2
ERCC2P18074 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.3■□□□□ 0.2
ERCC2P18074 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC2P18074 AC138649.4-201ENST00000612222 287 ntBASIC16.3■□□□□ 0.2
ERCC2P18074 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC2P18074 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.3■□□□□ 0.2
ERCC2P18074 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ERCC2P18074 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ERCC2P18074 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ERCC2P18074 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC2P18074 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ERCC2P18074 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.29■□□□□ 0.2
ERCC2P18074 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ERCC2P18074 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.29■□□□□ 0.2
ERCC2P18074 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.29■□□□□ 0.2
ERCC2P18074 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.29■□□□□ 0.2
ERCC2P18074 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.29■□□□□ 0.2
ERCC2P18074 AC074338.1-201ENST00000416825 156 ntBASIC16.29■□□□□ 0.2
ERCC2P18074 AC241585.1-201ENST00000433527 519 ntBASIC16.29■□□□□ 0.2
ERCC2P18074 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.29■□□□□ 0.2
ERCC2P18074 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.29■□□□□ 0.2
ERCC2P18074 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC2P18074 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.29■□□□□ 0.2
ERCC2P18074 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC2P18074 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.29■□□□□ 0.2
ERCC2P18074 AL390955.2-201ENST00000603032 514 ntBASIC16.29■□□□□ 0.2
ERCC2P18074 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.29■□□□□ 0.2
ERCC2P18074 AL844908.2-201ENST00000609461 460 ntBASIC16.29■□□□□ 0.2
ERCC2P18074 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC2P18074 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC2P18074 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ERCC2P18074 Z97205.2-201ENST00000564697 1639 ntBASIC16.29■□□□□ 0.2
ERCC2P18074 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
ERCC2P18074 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC2P18074 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ERCC2P18074 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC2P18074 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC2P18074 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.29■□□□□ 0.2
ERCC2P18074 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.29■□□□□ 0.2
ERCC2P18074 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ERCC2P18074 AC127383.1-201ENST00000444697 1800 ntBASIC16.29■□□□□ 0.2
ERCC2P18074 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ERCC2P18074 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
ERCC2P18074 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms