Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 AL080243.2-201ENST00000418783 582 ntBASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 AC009477.1-201ENST00000452936 217 ntBASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 SERBP1P3-201ENST00000459980 809 ntBASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 RN7SL618P-201ENST00000477850 296 ntBASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 U82695.1-201ENST00000635752 1889 ntBASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMIGD3P0DMS9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 PIN1P1-201ENST00000412108 996 ntBASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AC027307.3-201ENST00000594262 1100 ntBASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AC239800.4-201ENST00000603712 296 ntBASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AL844908.2-201ENST00000609461 460 ntBASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.4□□□□□ -0.1
TMIGD3P0DMS9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TMIGD3P0DMS9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms