Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AGAP14-201ENST00000624701 2060 ntBASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 GPX1P2-201ENST00000429271 606 ntBASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 FAM197Y8-203ENST00000450145 560 ntBASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 IFNL4P1-201ENST00000607083 540 ntBASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 AL078644.1-201ENST00000609881 752 ntBASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 AC012313.10-201ENST00000623509 926 ntBASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 TP73-AS1-207ENST00000624167 988 ntBASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 AC117500.6-201ENST00000624871 588 ntBASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV5A0A0B4J249 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 AL009183.1-201ENST00000603760 355 ntBASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV5A0A0B4J249 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
TRAV5A0A0B4J249 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms