Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 AC106872.11-201ENST00000605838 421 ntBASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 AC093726.1-201ENST00000608064 963 ntBASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 AL033527.5-201ENST00000641382 801 ntBASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 BNIP3P1-202ENST00000550043 1585 ntBASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 AC011477.6-201ENST00000604980 1927 ntBASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 AP001282.1-201ENST00000531301 1499 ntBASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HPS5Q9UPZ3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS5Q9UPZ3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.83■□□□□ 0.61
HPS5Q9UPZ3 AC018665.1-201ENST00000622927 1362 ntBASIC18.83■□□□□ 0.61
HPS5Q9UPZ3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HPS5Q9UPZ3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HPS5Q9UPZ3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
HPS5Q9UPZ3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.61
HPS5Q9UPZ3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HPS5Q9UPZ3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 PFN1P12-201ENST00000455938 534 ntBASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.83■□□□□ 0.6
HPS5Q9UPZ3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 MIR663B-201ENST00000408361 115 ntBASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 USP32P1-208ENST00000506594 1164 ntBASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.82■□□□□ 0.6
HPS5Q9UPZ3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.81■□□□□ 0.6
HPS5Q9UPZ3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms