Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 AC245884.6-201ENST00000515672 1067 ntBASIC15.69■□□□□ 0.1
NCDNQ9UBB6 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.69■□□□□ 0.1
NCDNQ9UBB6 NDUFV2P1-201ENST00000596415 907 ntBASIC15.69■□□□□ 0.1
NCDNQ9UBB6 AC138951.2-201ENST00000623455 1161 ntBASIC15.69■□□□□ 0.1
NCDNQ9UBB6 AC005252.2-201ENST00000624630 1141 ntBASIC15.69■□□□□ 0.1
NCDNQ9UBB6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 SNX33P1-201ENST00000592116 1762 ntBASIC15.69■□□□□ 0.1
NCDNQ9UBB6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.69■□□□□ 0.1
NCDNQ9UBB6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 MAGEA5-201ENST00000446757 942 ntBASIC15.68■□□□□ 0.1
NCDNQ9UBB6 AL133466.1-201ENST00000447582 150 ntBASIC15.68■□□□□ 0.1
NCDNQ9UBB6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 AL353726.2-201ENST00000623259 884 ntBASIC15.68■□□□□ 0.1
NCDNQ9UBB6 CU633904.3-201ENST00000624042 1029 ntBASIC15.68■□□□□ 0.1
NCDNQ9UBB6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCDNQ9UBB6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 MIR33B-201ENST00000385104 96 ntBASIC15.67■□□□□ 0.1
NCDNQ9UBB6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NCDNQ9UBB6 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms