Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 IGHV3-62-201ENST00000520057 340 ntBASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRTM1Q9HBL6 TNRC18P2-201ENST00000417666 2714 ntBASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AC126755.1-201ENST00000525846 6405 ntBASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AL139010.1-201ENST00000454878 894 ntBASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AC079140.1-201ENST00000508039 487 ntBASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 KRT8P48-201ENST00000515599 1220 ntBASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 LINC01225-203ENST00000563550 1244 ntBASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AC040169.1-201ENST00000565382 521 ntBASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRTM1Q9HBL6 AC009090.5-201ENST00000624886 2285 ntBASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 YBX2P1-201ENST00000394192 760 ntBASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 MIR940-201ENST00000401276 94 ntBASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.29■□□□□ 0.04
LRTM1Q9HBL6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms