Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 SPDYE7P-202ENST00000420373 878 ntBASIC14.21□□□□□ -0.13
NELFAQ9H3P2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 AC243562.2-201ENST00000561247 970 ntBASIC14.21□□□□□ -0.13
NELFAQ9H3P2 AC025678.2-201ENST00000562061 970 ntBASIC14.21□□□□□ -0.13
NELFAQ9H3P2 AC051619.7-201ENST00000568314 623 ntBASIC14.21□□□□□ -0.13
NELFAQ9H3P2 MIR4453-201ENST00000584019 89 ntBASIC14.21□□□□□ -0.13
NELFAQ9H3P2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 AC007967.4-201ENST00000614700 386 ntBASIC14.21□□□□□ -0.13
NELFAQ9H3P2 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NELFAQ9H3P2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NELFAQ9H3P2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.21□□□□□ -0.14
NELFAQ9H3P2 AC132872.4-202ENST00000622924 2756 ntBASIC14.21□□□□□ -0.14
NELFAQ9H3P2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
NELFAQ9H3P2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.21□□□□□ -0.14
NELFAQ9H3P2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NELFAQ9H3P2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
NELFAQ9H3P2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.2□□□□□ -0.14
NELFAQ9H3P2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.2□□□□□ -0.14
NELFAQ9H3P2 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 PAUPAR-201ENST00000630360 2965 ntBASIC14.2□□□□□ -0.14
NELFAQ9H3P2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NELFAQ9H3P2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 AL136379.1-201ENST00000623471 2642 ntBASIC14.19□□□□□ -0.14
NELFAQ9H3P2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.19□□□□□ -0.14
NELFAQ9H3P2 CNN2P2-201ENST00000443536 909 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms