Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 UBALD1-205ENST00000590891 2641 ntBASIC16.79■□□□□ 0.28
RAD9AQ99638 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RAD9AQ99638 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.79■□□□□ 0.28
RAD9AQ99638 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.79■□□□□ 0.28
RAD9AQ99638 UPF3AP2-201ENST00000457924 1132 ntBASIC16.79■□□□□ 0.28
RAD9AQ99638 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.79■□□□□ 0.28
RAD9AQ99638 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.79■□□□□ 0.28
RAD9AQ99638 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.79■□□□□ 0.28
RAD9AQ99638 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.79■□□□□ 0.28
RAD9AQ99638 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.79■□□□□ 0.28
RAD9AQ99638 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.79■□□□□ 0.28
RAD9AQ99638 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.79■□□□□ 0.28
RAD9AQ99638 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.79■□□□□ 0.28
RAD9AQ99638 AL096828.3-201ENST00000615354 462 ntBASIC16.79■□□□□ 0.28
RAD9AQ99638 BX539320.1-201ENST00000623759 877 ntBASIC16.79■□□□□ 0.28
RAD9AQ99638 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
RAD9AQ99638 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.79■□□□□ 0.28
RAD9AQ99638 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.79■□□□□ 0.28
RAD9AQ99638 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAD9AQ99638 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAD9AQ99638 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 AC078925.2-201ENST00000624013 1973 ntBASIC16.78■□□□□ 0.28
RAD9AQ99638 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 AL138799.1-201ENST00000448213 1675 ntBASIC16.78■□□□□ 0.28
RAD9AQ99638 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 AC080080.1-201ENST00000625121 2420 ntBASIC16.78■□□□□ 0.28
RAD9AQ99638 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.78■□□□□ 0.28
RAD9AQ99638 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.78■□□□□ 0.28
RAD9AQ99638 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAD9AQ99638 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAD9AQ99638 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.78■□□□□ 0.28
RAD9AQ99638 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.78■□□□□ 0.28
RAD9AQ99638 MIR663B-201ENST00000408361 115 ntBASIC16.78■□□□□ 0.28
RAD9AQ99638 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAD9AQ99638 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.78■□□□□ 0.28
RAD9AQ99638 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.78■□□□□ 0.28
RAD9AQ99638 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.78■□□□□ 0.28
RAD9AQ99638 AL590640.2-201ENST00000457038 527 ntBASIC16.78■□□□□ 0.28
RAD9AQ99638 HIST2H2BC-201ENST00000498492 580 ntBASIC16.78■□□□□ 0.28
RAD9AQ99638 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.78■□□□□ 0.28
RAD9AQ99638 AC105129.2-201ENST00000559536 390 ntBASIC16.78■□□□□ 0.28
RAD9AQ99638 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.78■□□□□ 0.28
RAD9AQ99638 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
RAD9AQ99638 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAD9AQ99638 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.78■□□□□ 0.28
RAD9AQ99638 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.78■□□□□ 0.28
RAD9AQ99638 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.78■□□□□ 0.28
RAD9AQ99638 RNF216P1-203ENST00000404404 2427 ntBASIC16.78■□□□□ 0.28
RAD9AQ99638 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.78■□□□□ 0.28
RAD9AQ99638 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAD9AQ99638 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RAD9AQ99638 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RAD9AQ99638 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAD9AQ99638 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.77■□□□□ 0.28
RAD9AQ99638 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
RAD9AQ99638 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RAD9AQ99638 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
RAD9AQ99638 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAD9AQ99638 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RAD9AQ99638 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.77■□□□□ 0.28
RAD9AQ99638 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.77■□□□□ 0.28
RAD9AQ99638 NUS1P3-201ENST00000423502 862 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms