Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRGV9Q99603 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.41□□□□□ -0.42
TRGV9Q99603 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.41□□□□□ -0.42
TRGV9Q99603 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
TRGV9Q99603 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.41□□□□□ -0.42
TRGV9Q99603 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.41□□□□□ -0.42
TRGV9Q99603 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 AC034105.1-201ENST00000563488 319 ntBASIC12.41□□□□□ -0.42
TRGV9Q99603 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.41□□□□□ -0.42
TRGV9Q99603 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 AC104109.2-201ENST00000602919 1418 ntBASIC12.41□□□□□ -0.42
TRGV9Q99603 AC099522.2-201ENST00000607001 744 ntBASIC12.41□□□□□ -0.42
TRGV9Q99603 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 AC018892.3-201ENST00000623986 2499 ntBASIC12.41□□□□□ -0.42
TRGV9Q99603 AC008267.7-201ENST00000624570 1194 ntBASIC12.41□□□□□ -0.42
TRGV9Q99603 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
TRGV9Q99603 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.41□□□□□ -0.42
TRGV9Q99603 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRGV9Q99603 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 MYO15B-237ENST00000642007 4893 ntBASIC12.4□□□□□ -0.42
TRGV9Q99603 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TRGV9Q99603 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV9Q99603 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV9Q99603 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.4□□□□□ -0.42
TRGV9Q99603 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
TRGV9Q99603 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
TRGV9Q99603 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 FAM220BP-201ENST00000377689 816 ntBASIC12.4□□□□□ -0.42
TRGV9Q99603 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.4□□□□□ -0.42
TRGV9Q99603 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.4□□□□□ -0.42
TRGV9Q99603 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.4□□□□□ -0.42
TRGV9Q99603 KRT18P2-201ENST00000447938 1258 ntBASIC12.4□□□□□ -0.42
TRGV9Q99603 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.4□□□□□ -0.42
TRGV9Q99603 RNA5SP410-201ENST00000516285 106 ntBASIC12.4□□□□□ -0.42
TRGV9Q99603 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRGV9Q99603 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.4□□□□□ -0.42
TRGV9Q99603 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.4□□□□□ -0.42
TRGV9Q99603 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.4□□□□□ -0.42
TRGV9Q99603 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms