Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.56■□□□□ 0.08
RAB3IPQ96QF0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 AL353732.1-201ENST00000569618 1459 ntBASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 STARP1-201ENST00000397973 869 ntBASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 AL137013.1-201ENST00000432946 1228 ntBASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 ATP5G1P1-201ENST00000448724 379 ntBASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 AC010203.1-204ENST00000548782 407 ntBASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 AP001350.2-201ENST00000625104 1094 ntBASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 AL928921.2-201ENST00000641325 2442 ntBASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 AC023024.2-201ENST00000623561 1993 ntBASIC15.55■□□□□ 0.08
RAB3IPQ96QF0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 TERF1P1-201ENST00000311003 1181 ntBASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 AC011467.2-201ENST00000598425 242 ntBASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IPQ96QF0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms