Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RNF183Q96D59 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RNF183Q96D59 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.86□□□□□ -0.51
RNF183Q96D59 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.86□□□□□ -0.51
RNF183Q96D59 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.86□□□□□ -0.51
RNF183Q96D59 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.86□□□□□ -0.51
RNF183Q96D59 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
RNF183Q96D59 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 CETN4P-206ENST00000642099 2168 ntBASIC11.86□□□□□ -0.51
RNF183Q96D59 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
RNF183Q96D59 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.86□□□□□ -0.51
RNF183Q96D59 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF183Q96D59 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
RNF183Q96D59 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RNF183Q96D59 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
RNF183Q96D59 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF183Q96D59 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF183Q96D59 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.85□□□□□ -0.51
RNF183Q96D59 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF183Q96D59 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF183Q96D59 MTND6P24-201ENST00000440466 518 ntBASIC11.85□□□□□ -0.51
RNF183Q96D59 TSPY16P-201ENST00000449843 468 ntBASIC11.85□□□□□ -0.51
RNF183Q96D59 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.85□□□□□ -0.51
RNF183Q96D59 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.85□□□□□ -0.51
RNF183Q96D59 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF183Q96D59 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.85□□□□□ -0.51
RNF183Q96D59 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.85□□□□□ -0.51
RNF183Q96D59 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
RNF183Q96D59 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
RNF183Q96D59 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.85□□□□□ -0.51
RNF183Q96D59 AC105021.1-202ENST00000570572 669 ntBASIC11.85□□□□□ -0.51
RNF183Q96D59 AC026979.3-201ENST00000607315 403 ntBASIC11.85□□□□□ -0.51
RNF183Q96D59 RN7SL828P-201ENST00000607615 303 ntBASIC11.85□□□□□ -0.51
RNF183Q96D59 AL589739.1-201ENST00000607720 493 ntBASIC11.85□□□□□ -0.51
RNF183Q96D59 AL138828.2-201ENST00000615812 383 ntBASIC11.85□□□□□ -0.51
RNF183Q96D59 SPDYE12P-201ENST00000618416 771 ntBASIC11.85□□□□□ -0.51
RNF183Q96D59 AL590560.3-201ENST00000623350 461 ntBASIC11.85□□□□□ -0.51
RNF183Q96D59 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF183Q96D59 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.85□□□□□ -0.51
RNF183Q96D59 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
RNF183Q96D59 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
RNF183Q96D59 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms