Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 AC106881.1-201ENST00000605849 3329 ntBASIC13.82□□□□□ -0.2
CCDC107Q8WV48 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 AP003680.1-201ENST00000598970 3660 ntBASIC13.82□□□□□ -0.2
CCDC107Q8WV48 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 AC108751.1-201ENST00000490852 363 ntBASIC13.81□□□□□ -0.2
CCDC107Q8WV48 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 AC010654.1-201ENST00000615722 808 ntBASIC13.81□□□□□ -0.2
CCDC107Q8WV48 AL773604.1-201ENST00000617417 272 ntBASIC13.81□□□□□ -0.2
CCDC107Q8WV48 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CCDC107Q8WV48 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.8□□□□□ -0.2
CCDC107Q8WV48 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms