Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST2Q8NFU1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 TOMM22P5-201ENST00000416399 439 ntBASIC17.03■□□□□ 0.32
BEST2Q8NFU1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 RRP7BP-205ENST00000566851 833 ntBASIC17.03■□□□□ 0.32
BEST2Q8NFU1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST2Q8NFU1 FER1L4-210ENST00000615531 5998 ntBASIC17.02■□□□□ 0.32
BEST2Q8NFU1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 KRT18P64-201ENST00000434946 1219 ntBASIC17.02■□□□□ 0.32
BEST2Q8NFU1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 MIR4313-201ENST00000580760 101 ntBASIC17.02■□□□□ 0.32
BEST2Q8NFU1 CHCHD2P3-201ENST00000603038 451 ntBASIC17.02■□□□□ 0.32
BEST2Q8NFU1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.02■□□□□ 0.32
BEST2Q8NFU1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.02■□□□□ 0.32
BEST2Q8NFU1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.02■□□□□ 0.31
BEST2Q8NFU1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BEST2Q8NFU1 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BEST2Q8NFU1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.02■□□□□ 0.31
BEST2Q8NFU1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.31
BEST2Q8NFU1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
BEST2Q8NFU1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST2Q8NFU1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms