Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 AL512361.1-201ENST00000554200 418 ntBASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 HNRNPUP1-201ENST00000554987 333 ntBASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 AC027796.2-201ENST00000575326 344 ntBASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 AL590560.3-201ENST00000623350 461 ntBASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 AC018892.3-201ENST00000623986 2499 ntBASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 MST1L-201ENST00000442552 2185 ntBASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC148Q8NFR7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 AC136604.1-201ENST00000418535 575 ntBASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 AC010336.2-201ENST00000564226 506 ntBASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 AC105917.1-201ENST00000506637 2539 ntBASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC148Q8NFR7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 BASP1P1-201ENST00000430708 665 ntBASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 AL390955.2-201ENST00000603032 514 ntBASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCDC148Q8NFR7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms