Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF397Q8NF99 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 AL365330.1-201ENST00000607459 531 ntBASIC17.65■□□□□ 0.42
ZNF397Q8NF99 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF397Q8NF99 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF397Q8NF99 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF397Q8NF99 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
ZNF397Q8NF99 CICP23-201ENST00000605013 2741 ntBASIC17.64■□□□□ 0.42
ZNF397Q8NF99 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.64■□□□□ 0.42
ZNF397Q8NF99 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 AC093724.1-201ENST00000448659 1027 ntBASIC17.64■□□□□ 0.41
ZNF397Q8NF99 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 AC064836.3-201ENST00000607928 673 ntBASIC17.64■□□□□ 0.41
ZNF397Q8NF99 AC010507.1-201ENST00000633895 436 ntBASIC17.64■□□□□ 0.41
ZNF397Q8NF99 AC020658.6-201ENST00000623564 1870 ntBASIC17.64■□□□□ 0.41
ZNF397Q8NF99 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ZNF397Q8NF99 AL161772.1-201ENST00000610494 4412 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms