Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 Z93015.1-201ENST00000451718 390 ntBASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 AP001582.1-201ENST00000525856 295 ntBASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 ACTG1P17-201ENST00000558391 1119 ntBASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.69■□□□□ 0.74
CARMIL3Q8ND23 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 FAM197Y7-201ENST00000432892 766 ntBASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 AC078819.1-201ENST00000547454 765 ntBASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 AC012085.1-201ENST00000548270 765 ntBASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 AC138951.2-201ENST00000623455 1161 ntBASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CARMIL3Q8ND23 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 AC006001.1-201ENST00000325130 474 ntBASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 CALR4P-201ENST00000431943 946 ntBASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 AC104306.2-201ENST00000451877 341 ntBASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 AC005052.1-201ENST00000625181 2492 ntBASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CARMIL3Q8ND23 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.66■□□□□ 0.74
CARMIL3Q8ND23 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CARMIL3Q8ND23 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CARMIL3Q8ND23 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.66■□□□□ 0.74
CARMIL3Q8ND23 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CARMIL3Q8ND23 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CARMIL3Q8ND23 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.66■□□□□ 0.74
CARMIL3Q8ND23 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CARMIL3Q8ND23 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CARMIL3Q8ND23 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms