Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SYNE4Q8N205 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SYNE4Q8N205 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 MIR1247-201ENST00000408206 136 ntBASIC19.56■□□□□ 0.72
SYNE4Q8N205 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 GAPDHP40-201ENST00000505218 1006 ntBASIC19.56■□□□□ 0.72
SYNE4Q8N205 ZNF767P-206ENST00000513792 565 ntBASIC19.56■□□□□ 0.72
SYNE4Q8N205 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SYNE4Q8N205 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNE4Q8N205 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 GPAA1P2-201ENST00000417923 928 ntBASIC19.55■□□□□ 0.72
SYNE4Q8N205 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 AL355864.2-201ENST00000447420 863 ntBASIC19.55■□□□□ 0.72
SYNE4Q8N205 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 AP001582.1-201ENST00000525856 295 ntBASIC19.55■□□□□ 0.72
SYNE4Q8N205 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 AC069224.1-201ENST00000566372 1715 ntBASIC19.55■□□□□ 0.72
SYNE4Q8N205 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 AC009486.1-201ENST00000569860 813 ntBASIC19.55■□□□□ 0.72
SYNE4Q8N205 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 AC010328.2-201ENST00000597698 1111 ntBASIC19.55■□□□□ 0.72
SYNE4Q8N205 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SYNE4Q8N205 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SYNE4Q8N205 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNE4Q8N205 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNE4Q8N205 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNE4Q8N205 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNE4Q8N205 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNE4Q8N205 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SYNE4Q8N205 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNE4Q8N205 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 AC016694.1-201ENST00000434179 700 ntBASIC19.54■□□□□ 0.72
SYNE4Q8N205 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.54■□□□□ 0.72
SYNE4Q8N205 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 AC243960.2-201ENST00000600996 747 ntBASIC19.54■□□□□ 0.72
SYNE4Q8N205 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNE4Q8N205 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SYNE4Q8N205 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.54■□□□□ 0.72
SYNE4Q8N205 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms