Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ATPAF1Q5TC12 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 FAM86C2P-203ENST00000528684 1004 ntBASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 AC091812.2-201ENST00000619081 385 ntBASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 AKAP8P1-201ENST00000434743 1349 ntBASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 AC023908.3-201ENST00000564211 3047 ntBASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ATPAF1Q5TC12 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 AP003680.1-201ENST00000598970 3660 ntBASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 WASH6P-202ENST00000359512 1437 ntBASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.84□□□□□ -0.19
ATPAF1Q5TC12 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms