Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RBM48Q5RL73 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RBM48Q5RL73 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RBM48Q5RL73 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RBM48Q5RL73 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RBM48Q5RL73 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RBM48Q5RL73 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.55□□□□□ -0.08
RBM48Q5RL73 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RBM48Q5RL73 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RBM48Q5RL73 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RBM48Q5RL73 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RBM48Q5RL73 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.54□□□□□ -0.08
RBM48Q5RL73 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 AC027601.5-201ENST00000624065 2482 ntBASIC14.54□□□□□ -0.08
RBM48Q5RL73 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 AC015656.1-201ENST00000624209 3578 ntBASIC14.54□□□□□ -0.08
RBM48Q5RL73 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 BX276092.5-203ENST00000456199 560 ntBASIC14.54□□□□□ -0.08
RBM48Q5RL73 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 AC022616.7-201ENST00000525383 220 ntBASIC14.54□□□□□ -0.08
RBM48Q5RL73 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 AC021097.1-201ENST00000607902 574 ntBASIC14.54□□□□□ -0.08
RBM48Q5RL73 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 AC134407.2-201ENST00000625089 1978 ntBASIC14.54□□□□□ -0.08
RBM48Q5RL73 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 AL359183.1-201ENST00000623796 2132 ntBASIC14.54□□□□□ -0.08
RBM48Q5RL73 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.54□□□□□ -0.08
RBM48Q5RL73 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RBM48Q5RL73 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 AC129492.6-201ENST00000611383 1305 ntBASIC14.53□□□□□ -0.08
RBM48Q5RL73 AC067750.1-201ENST00000608826 6545 ntBASIC14.53□□□□□ -0.08
RBM48Q5RL73 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 AC093724.1-201ENST00000448659 1027 ntBASIC14.53□□□□□ -0.08
RBM48Q5RL73 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 BX005266.1-201ENST00000473402 457 ntBASIC14.53□□□□□ -0.08
RBM48Q5RL73 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 AL022326.1-202ENST00000641533 845 ntBASIC14.53□□□□□ -0.08
RBM48Q5RL73 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RBM48Q5RL73 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.53□□□□□ -0.08
RBM48Q5RL73 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms